Andy Nguyen,M.D./ UT-Medical School at Houston, Pathology/
Last Revision on: 12/2/2024


- Dr. Nguyen's CV
- Web Pages of Interests

---

1. Benign Hematopathology and Special Techniques Review, PowerPoint files for Review of Benign Hematopathology and Special Techniques.
   


2. CD-MARKER PF, a dynamic Web-based database for teaching differential diagnosis of hematologic neoplasms using immunophenotyping data obtained with flow cytometry. This database is based on the latest World Health Organization (WHO) classification and current data on the incidence of positive and negative results for each neoplasm.
   • Read Abstract on CD-MARKER PF
   • Read Mathematical Algorithm of CD-MARKER PF
   • Run CD-Marker PF [Intranet use only; no public access]
    
3. WEB COAG, a Web-based decision-support system for diagnosis of coagulopathy.
   • Read Abstract on WEB COAG
   • Run WEB COAG
     
     
4. HEMATOLOGY CONFERENCES, PDF files used in the monthly Hematology Case Conference.
   
   
5. XPHEMO, a decision-support system for laboratory diagnosis of hemoglobin disorders.
   • Read Abstract on XPHEMO
   • View Graphic Illustrations for XPHEMO
   • Download XPHEMO
     
     
6. Coagulation Case Studies, Coagulation case studies on major coagulopathies.
   
   
7. Coagulation Unknown Conferences, Coagulation cases used in unknown conferences.
   
   
8. INTERPRETATION REPORT TEMPLATES USED FOR TRAINING, Web-based templates to assist pathology residents in generating report for various activities.
   • Coagulation Report Templates , Read Abstract
     
   • Peripheral Blood Smear Report Templates, Read Abstract
     
   • Thromboelastograph Templates , Read Abstract
     
   • Bone Marrow Templates
     
   • Lymph Node Templates
     
   • Phrases for Special Stains & Immunohistochemical Stains, QA Consensus, Adding CBC Results to Bone Marrow, Bone Marrow Schedule
     
   • Flow Cytometry Templates
     
   • Electron Microscope Templates
     
   • Addenda for Molecular results (cytogenetics/FISH/PCR)
     
   
   
   • Cancer Synoptic Case Summary: Bone Marrow
     
   • Cancer Synoptic Case Summary: Hodgkin Lymphoma
     
   • Cancer Synoptic Case Summary: NonHodgkin Lymphoma
     
   
   
• Ace My Path: Hematopathology Reporting Templates
  Co-authoring Textbook with Dr. A Gupta


9. PROCEDURE NOTES, MOLECULAR TEST PANELS, BONE MARROW FORM, INTRADEPT CONSULTATION, ORDER FORMS, MHH-TMC MAP.
   • Bone Marrow Procedure Note
     
   • Therapeutic Pheresis Consultation / Procedure Notes / E Orders
     
   • Flow Cytometry, Cytogenetics, FISH, and PCR/NGS Testing
     
   • ALL Testing (updated in May 2024)
     
   • T ALL Minimal Residual Disease (MRD) Flow Cytometry Panel, Phenopath
     
   • Bone Marrow Transcription Template
     
   • Flow Cytometry Transcription Template
     
   • Intradepartmental Consultation
     
   • MHH Histology Request Form
     
   • MHH Immunostain Request Form
     
   • UT Histology Request Form
     
   • UT Immunostain Request Form
     
   • UT List of CPT Codes -page 1
     
   • UT List of CPT Codes -page 2
     
   • MHH-TMC Campus Map
     
   
   
10. Hematopathology Rotation, Description of Hematopathology Rotation at Memorial Hermann Hospital.
    


11. Introduction to typical case materials on Hematopathology Rotation
    
    
12. Board Review for Hematopathology , Review files for benign hemepath, malignant hemepath, and coagulation.
    


13. Coagulation-based Hemotherapy , Perioperative transfusion support based on rapid coagulation tests for advanced heart failure patients.
    


14. Diffuse Large B Cell Lymphoma Subtypes Templates, using FileMaker Pro Database [Intranet use only; no public access]
    • Read Abstract on DLBCL Subtypes
    • Log in DLBCL Subtypes Templates
      
      
15. Immunology Reporting Templates
    • Immunology Reporting Templates, Dr. S. Risin
    • Additional Immunology Reporting Templates, Dr. A. Nguyen
    • Reference Data on Capillary Hgb electrophoresis Zones and Retention Time for Hgb Variants
    • Common Hemoglobinopathy List
    • CSF Protein Electrophoresis
    
    
16. RA-Easy: DSRIP Reporting Templates for Rheumatoid Arthritis, using FileMaker Pro Database [Intranet use only; no public access]
    • Read Abstract on RA-Easy
    • Log in RA-Easy
      
      
17. Quick Start Guides for Various Computer Platforms
    • Quick Start Guide for Epic Beaker-AP Reporting
    • Condensed Outline for Epic Beaker-AP Reporting
    • Quick Start Guide for PathoZoom Camera & Scanner
    • Quick Start Guide for ASI Genesis IMS
    • Quick Start Guide for Philips IMS (SG-60 Scanners)
    
    
18. Prognosis of acute myeloid leukemia (AML) with mutations and no cytogenetic abnormalities-TCGA Database
    • Read Abstract on Prognosis of AML with mutations
    • Look up Prognosis of AML with mutations
      
      



---

19. SEMINARS ON DEEP LEARNING APPLICATIONS TO PATHOLOGY
    • Deep Learning Seminars presented by Dr Andy Nguyen (in chronological order)
      
      
20. Deep Learning for acute myeloid leukemia (AML) Prognosis
    • Read Abstract on Deep Learning for AML Prognosis
    • Publication: Mei Lin, Brenda Mai, Hanadi El Achi, Nfn. Aakash, Iris Wang, Zhihong Hu, Lei Chen, Md. Amer Wahed, Adan Rios, and Andy N.D. Nguyen. Application of Deep Learning in Predicting the Prognosis of Acute Myeloid Leukemia using Cytogenetics, Age, and Mutations. Clinical Oncology and Research. 2020, ISSN 2613-4942
      
      
21. Automated Diagnosis of Lymphoma with Digital Pathology Images Using Deep Learning
    • Read Abstract on Automated Diagnosis of Lymphoma with Digital Pathology Images Using Deep Learning
    • Publication: Hanadi El Achi, MD; Tatiana Belousova, MD, Lei Chen, MD; Amer Wahed, MD; Iris Wang, MD; Zhihong Hu, MD; Zeyad Kanaan, MD, Adan Rios, MD, Andy N.D. Nguyen, MD. Automated Diagnosis of Lymphoma with Digital Pathology Images Using Deep Learning. Annals of Clinical and Laboratory Science; 2019 Mar;49(2):153-160
      
    • Full presentation: Automated Lymphoma Diagnosis with Whole Slide Imaging and Deep Learning
    Digital Pathology & Artificial Intelligence Congress: USA, Nov 19-20, 2020
    
    
22. Deep Learning in Hematopathologic Genomics & Proteomics
    • Read Abstract on Proteomics Analysis of FLT3-ITD Mutation in Acute Myeloid Leukemia Using Deep Learning Neural Network
    • Publication: Christine A. Liang, MD, Lei Chen, MD, Amer Wahed, MD, Andy N.D. Nguyen, MD. Proteomics Analysis of FLT3-ITD Mutation in Acute Myeloid Leukemia Using Deep Learning Neural Network. Annals of Clinical and Laboratory Science; 2019 Jan;49(1):119-126
      
      
23. Deep Learning for Digital Image Analysis with Whole Slide Imaging for Lymphoma Diagnosis: Challenges and Promises
    • Read Abstract on Deep Learning for Digital Image Analysis with Whole Slide Imaging for Lymphoma Diagnosis: Challenges and Promises
    • Publication: Andy N.D. Nguyen and Kareem A. Allam (2022) Deep Learning for Digital Image Analysis with Whole Slide Imaging for Lymphoma Diagnosis: Challenges and Promises, 21st Century Pathology, Volume 2 (2): 116
      
      
24. Deep Learning Provides Rapid Screen for Breast Cancer Metastasis with Sentinel Lymph Nodes
    • Read Abstract on Deep Learning Provides Rapid Screen for Breast Cancer Metastasis with Sentinel Lymph Nodes
    • Publication: Kareem Allam, Xiaohong Iris Wang, Songlin Zhang, Jianmin Ding, Kevin Chiu, Karan Saluja, Amer Wahed, Hongxia Sun, and Andy N.D. Nguyen. Deep Learning Provides Rapid Screen for Breast Cancer Metastasis with Sentinel Lymph Nodes. Annals of Clinical & Laboratory Science, vol. 53, no. 6, 2023
      
      
25. Deep Learning-Based Morphological Classification between Classical Hodgkin Lymphoma and Anaplastic Large Cell Lymphoma
    • Read Abstract on Deep Learning for Classification between Classical Hodgkin Lymphoma and Anaplastic Large Cell Lymphoma
    • Publication: Daniel Rivera, Kristine Ali, Rongzhen Zhang, Brenda Mai, Hanadi El Achi, Jacob Armstrong, Amer Wahed, and Andy Nguyen. Deep Learning-Based Morphological Classification between Classical Hodgkin Lymphoma and Anaplastic Large Cell Lymphoma: A Proof of Concept and Literature Review, 21st Century Pathology, Volume 4 (1): 159
      
      
26. WHOLE-SLIDE-IMAGING (WSI) CASE LIST FOR TELEPATHOLOGY
    • Introductory background: a Pilot Telepathology Project for Consultation Cases with Whole Slide Imaging
    • Look up for WSI cases with established Diagnosis
      
    • arXiv:2412.10383: Telepathology in Hematopathology Diagnostics: A Collaboration Between Ho Chi Minh City Oncology Hospital and University of Texas Health-McGovern Medical School
      
      

---